Albert Sorribas - Papers (2006-2010)

  1. Sorribas, A, Muiño, JM, Voit, EO. (2006) GS-distributions: a new family of distributions for continous unimodal variables. Computational Statistics and Data Analysis 50:2769-2798
  2. Vilaprinyo E, Alves R, Sorribas A. (2006) Use of physiological constraints to identify quantitative design principles for gene expression in yeast adaptation to heat shock. BMC Bioinformatics. 7:184.
  3. Sorribas, A., Muiño, JM, Rué, M, Fibla, J (2006) Univariate parametric survival analysis using GS-distributions.Statistics and Operations Research Transactions. 30 (2) 205-218
  4. Alves R, Sorribas, A. (2007) In silico pathway reconstruction: Iron-sulfur cluster biogenesis in Saccharomyces cerevisiae. BMC Syst Biol. 31;1:10.
  5. Trujillano J, Muino JM, March J, Sorribas A. (2007) A more flexible parametric estimation of univariate reference intervals: a new method based on the GS-distribution.
    Clin Chim Acta. 379(1-2):71-80. Epub 2006 Dec 22.
  6. Sorribas A, Hernandez-Bermejo B, Vilaprinyo E, Alves R. (2007) Cooperativity and saturation in biochemical networks: A saturable formalism using Taylor series approximations. Biotechnol Bioeng. 97(5):1259-77.
  7. Alves R, Vilaprinyo E, Hernandez-Bermejo B, Sorribas A. (2008) Mathematical formalisms based on approximated kinetic representations for modeling genetic and metabolic pathways. Biotechnology and Genetic Engineering Reviews - Vol. 25, 1-40
  8. Alves R. Vilaprinyo E, Sorribas A (2008) Integrating Bioinformatics and Computational Biology: Perspectives and Possibilities for in silico network reconstruction in Molecular Systems Biology. Current Bioinformatics 3:98-129
  9.  Alves, R. ,Vilaprinyo, E., Sorribas, A. (2008)  Semi-Automated Reconstruction of Biological Circuits. Philippine Information Technology Journal 1: 32.
  10. Vilaprinyo, E., Alves, R., Sorribas, A., Salvador, A. (2008)  Gene expression levels in Saccharomyces cerevisisae strongly reflect energetic cost rates of gene products. Philippine Information Technology Journal 1: 37.
  11. Vilaprinyo, E., Salvador, A., Alves, R.,& Sorribas, A. (2008)  Energetic Constraints in Adaptive gene expression responses of yeast under environmental changes.  Philippine Information Technology Journal 1: 36.
  12. Sorribas A., Vilaprinyo, E. & Alves, R.(2008)  Approximate formalisms: does anything work?. Philippine Information Technology Journal 1: 34.
  13. Alves R, Vilaprinyo E, Sorribas A, Herrero E. (2009) Evolution based on domain combinations: the case of glutaredoxins. BMC Evolutionary Biology 2009, 9:66 doi:10.1186/1471-2148-9-66
  14. Guillén-Gosálbez-G, Sorribas, A. (2009) Identifying quantitative operation principles in metabolic pathways: a systematic method for searching feasible en zyme activity patterns leading to cellular adaptive responses. BMC Bioinformatics 2009, 10:386
  15. Guillén-Gosálbez G, Pozo C, Jiménez L, Sorribas A (2009) A global optimization strategy to identify quantitative design principles for gene expression in yeast adaptation to heat shock. Computer Aided Chemical Engineering, Volume 26, 2009, Pages 1045-1050
  16. Guillén-Gosálbez G, Pozo C, Jiménez L, Sorribas A (2009) An Outer Approximation Algorithm for the Global Optimization of Regulated Metabolic Systems. Computer Aided Chemical Engineering Volume 27, 2009, Pages 1707-1712
  17. Vilaprinyo E, Alves R, Sorribas A (2010) Minimization of biosynthetic costs in adaptive gene expression responses of yeast to environmental changes. PLoS Comput Biol 6(2): e1000674. doi:10.1371/journal.pcbi.1000674
  18. Sorribas A, Pozo C, Vilaprinyo E, Guillén-Gosálbez G, Jimenez L, Alves R (2010) Optimization and evolution in metabolic pathways: global optimization techniques in Generalized Mass Action models. J.Biotechnol. 149: 141-153
  19. Pozo C, Guillén-Gosálbez G, Sorribas A, Jimenez L (2010) Outer approximation-based algorithm for biotechnology studies in systems biology. Computers & Chemical Engineering 34 (2010) 1719–1730